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You're putting your body in a catabolic state and that means it's creating energy from amino acids. This is a chemical reaction that takes an amino acid molecule, strips the nitrogen atom from it, and processes what's left into glucose and then energy.
Typically, the nitrogen atom is passed on and converted to urea by the kidneys and later excreted as urine, but in some cases, the chemical reaction may be so overwhelming that the kidneys can't process all of the incoming nitrogen so it is instead converted to NH3 and excreted through your sweat glands.
You can't stop your body from going catabolic, but if you're running 80 to 90 minutes a day you should be drinking in excess of a gallon of liquids (preferably water) per day to help your kidneys do their job. Also, you need to make sure that you're getting adequate caloric intake at proper macronutrient levels so your body has places to go for energy.
I am 15-days into a 30-day juice fast where I am only consuming fresh pressed fruit and vegetable juices; 7-pints per day. I probably could be consuming even more water, and I will increase my h20 intake. I am also working out by going to 4 or 5 one-hour spin classes per week followed by 45 minutes of resistance training. For the last few days I have been occasionally smelling the strong odor of ammonia that is not detectable by my girlfriend. I've lost about 10 pounds in the last 15-days of this program, 190 to 180 lbs, 5'10", 38-year-old male.
My question is: am I not taking in enough macro-nutrients (or protein specifically) to support my workouts, as No1UKnowHere suggests, or is burning more calories than I take in the only way to lose the weight that I should lose, as R_Weil's answer suggests to me?
Ketone production is very common when people lose weight rapidly, especially with intense exercise (whether the diet is high or low carb). It occurs when people go on high protein diets with low carbs (like Atkins), but also like what you're doing, mostly because the weight loss is so rapid. If you increased your calorie intake, started losing weight slower (1-2 pounds a week), and started consuming 20% of your calories from fat, the smell would diminish or go away completely. Start searching online for search terms such as acetone, ketones, ketone bodies, exercise, and rapid weight loss, and you'll come up with information about this.
Take care. Rich

You can start your own discussion or ask questions using the orange "Post Now" button up there ^^^^.
I'm looking forward to getting to know you better
Haylen
Rich
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